PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021299813.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Dof

Protein Properties

Length: 499aa MW: 54534.7 Da PI: 8.5293

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021299813.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	6e-39	141	201	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrk k+ss XP_021299813.1 141 PDKILPCPRCNSKETKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKTKSSS 201 7899*****************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MSKLNDSSVI KLFGKTIPLP TLNQEEALAD QEIPFKGAAR EDCCDGNLVS SSSSLGGVNS 60 NDGIQAQVTR EDQESTQKEL PKDKQKDSTP DQIRDDLKDP TALSRNDRSP LAERNTSSLK 120 SSKNEGTSET TSSQEKTLKK PDKILPCPRC NSKETKFCYY NNYNVNQPRH FCKNCQRYWT 180 AGGTMRNVPV GAGRRKTKSS STLHYHHIMI SEAIRAAKAS AANGMHGNPS CENNNGHVLS 240 FGSESSIPVA SVFNLSGKTQ INVQNGFRKT EQRYLVEDNH SRESLITASY SLEKEGNASL 300 NQAEVKNSHW FTSTAPCFSR PSWPYPWDSI PAMLPHPPAL CPPGLPVTFH LAPPTYSGCS 360 VPSPWDVPVT SPSPSSANQC APSSSPTSPT LGKHSRDENF LSPANLEKEK PSGESNKSEG 420 RALISKTLRI DDPGQTAKSS MLATLVIEGK KTNSINSGGL FDGFQSKSRD EKNYRLETFP 480 VLRANPAALS RSLNFHENT

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MSKLNDSSVI KLFGKTIPLP TLNQEEALAD QEIPFKGAAR EDCCDGNLVS SSSSLGGVNS  60
NDGIQAQVTR EDQESTQKEL PKDKQKDSTP DQIRDDLKDP TALSRNDRSP LAERNTSSLK  120
SSKNEGTSET TSSQEKTLKK PDKILPCPRC NSKETKFCYY NNYNVNQPRH FCKNCQRYWT  180
AGGTMRNVPV GAGRRKTKSS STLHYHHIMI SEAIRAAKAS AANGMHGNPS CENNNGHVLS  240
FGSESSIPVA SVFNLSGKTQ INVQNGFRKT EQRYLVEDNH SRESLITASY SLEKEGNASL  300
NQAEVKNSHW FTSTAPCFSR PSWPYPWDSI PAMLPHPPAL CPPGLPVTFH LAPPTYSGCS  360
VPSPWDVPVT SPSPSSANQC APSSSPTSPT LGKHSRDENF LSPANLEKEK PSGESNKSEG  420
RALISKTLRI DDPGQTAKSS MLATLVIEGK KTNSINSGGL FDGFQSKSRD EKNYRLETFP  480
VLRANPAALS RSLNFHENT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	6e-82	Dof family protein