PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021299079.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 177aa    MW: 20452.1 Da    PI: 10.0595
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021299079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.61.3e-3398156159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d++vv++tYeg H+h+
  XP_021299079.1  98 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDESVVVTTYEGMHTHP 156
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MENYQMFFPI SSSAASAYPF PTNMAPSSQV FNNFHGNSSN GFLGLKTESF IQKPEVKEIV  60
QNGSFVGSET EVKSGKKKEK KIRKPRYAFQ TRSQVDILDD GYRWRKYGQK AVKNNKFPRS  120
YYRCTHQGCN VKKQVQRLTK DESVVVTTYE GMHTHPIEKP SDNFEHILSQ MQIYTPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.13e-60WRKY family protein