PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021298442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 309aa MW: 33783.9 Da PI: 8.7644 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.6 | 6.2e-29 | 155 | 213 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed+ v++ tYegeHnh XP_021298442.1 155 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSVEDQLVLVATYEGEHNH 213 58***************************99**************************** PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 309 aa Download sequence |
MDSSSWVDTS LDLNASARSL QLGTPKKEST SNLIVFGKKL SAKEETGALV EELNRVSAEN 60 KKLTEMLTAM CESYNALQSQ LMDLMSKNPE KELSPSKKRK SESSNNNDNN FGIIGNSESS 120 STDEESCKKA REEIIKAKIS RVSVRTEASD TSLVVKDGYQ WRKYGQKVTR DNPSPRAYFK 180 CSFAPSCPVK KKVQRSVEDQ LVLVATYEGE HNHLPPSQMD ATSGSSRCMT LGSVPCSATL 240 NSSGPTVTLD LTKSKASTDE ARNSKSKMES PEVRQYLVEQ MASSLTKDPN FTAALAAAIS 300 GRMFSTKSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G80840.1 | 3e-94 | WRKY family protein |