PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297897.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 272aa    MW: 29831.1 Da    PI: 8.2506
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.8e-2059108255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa+a++aa++k++g
  XP_021297897.1  59 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAAAYDAAALKFKG 108
                     7********.**********94....45************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MAAASAFAHH HRLNTQSDIL PHQQATDQVS VLTEQDQSSL PAKDQVFLLW KGNVIRKRHY  60
RGVRQRPWGK WAAEIRDPKK AARVWLGTFD TAEAAAAAYD AAALKFKGSK AKLNFPERVQ  120
GGGLDQFCFS ACSNNNPIPV PNEQVPSSGS SSTPQLPPPP PNIAPSSLPH EAFPYLSQYV  180
QLLSSDFTDN YWQYVESAGL HTQQPALFSH TSSSMTSSTT YSGMARNQVG EHDELPRFSS  240
PAQMGSFSSS SPSSHLFLNP GNDYSEGRKP KE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.11e-31ERF family protein