PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297461.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family G2-like
Protein Properties Length: 321aa    MW: 34801.7 Da    PI: 7.0004
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297461.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.73.4e-30106159155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv+av++L G+++A+Pkti+++m+v+gLt+e+v+SHLQkYRl
  XP_021297461.1 106 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQFMSVDGLTRENVASHLQKYRL 159
                     59*******************.********************************8 PP
2Myb_DNA-binding47.25.1e-15108158148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
   XP_021297461.1 108 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQFMSvDGLTRENVASHLQKYR 158
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MTDEDSNWFA RWEEELPSPE ELMPLSQTLI TPDLALAFDI RNPNHHHHHH LQQQQQQQQQ  60
PQPPPPPPPS AAGQPPSQPT SAEFAADSGD LGSGAAGDEP ARTLKRPRLV WTPQLHKRFV  120
DAVAHLGIKN AVPKTIMQFM SVDGLTRENV ASHLQKYRLY LKRMQGLSGG GGGGGGGANG  180
GAGGASLSAT ADPVTDHLFA SSPVPPHFLH PGRSNSEHFL PFVPVPALQH HHHHQQQQIV  240
AAAVGHPHLQ TPYHRQMGHF GSSPNGQFEH PFLGRQTQQP MHRMGGAPVH NQVPSSYVED  300
LESANGNGGR KVLTLFPTGD D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.15e-85G2-like family protein