PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297186.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 377aa    MW: 41305.1 Da    PI: 6.5273
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY841.5e-26199259259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqKe+ gs++pr+YYrCt++   +Cp+kk+v+r ++d  ++e+tY ++H+++
  XP_021297186.1 199 EDNFTWRKYGQKEILGSRYPRAYYRCTHQklyNCPAKKQVQRLDNDFYTFEVTYISQHTCH 259
                     79***************************999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MFKSETDKAK RKRPDQTMEE TFSLILHGCK LAKDLESNLG NLASQPEILS KSCDDIVKVF  60
AAAKGRLNAD QDPASFTQLL RESPSSSQQP QQSTDPSLQE WLKYGVITQA MDMIQQKVLA  120
GKAPFETNEM GGKNLLEGSA SARLKGSVVG EIQAMELSDS GRGSSSSSQR PRRSRKDDEE  180
KRTMTVPAPQ MGNTDLPPED NFTWRKYGQK EILGSRYPRA YYRCTHQKLY NCPAKKQVQR  240
LDNDFYTFEV TYISQHTCHM SSTAPSIPPP PPLETGTQDQ IMTQAMVSQP TPASSSSVPL  300
GRWLSMEFNS LASASCGSGS GGAGGSTASA RYGREVDYPA VADLADVMFN SGSSSSNSME  360
FIFPSVEDKW EAGDKKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.11e-53WRKY family protein