PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297072.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family SRS
Protein Properties Length: 390aa    MW: 43354.7 Da    PI: 7.9423
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70224.29.7e-085897543
          DUF702  5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv.kstW 43
                    + +C +CGn a+  C ++ C+ CC      C+ hv ks  
  XP_021297072.1 58 KPKCIQCGNVARSRCPYRSCKSCCSKAQNPCHIHVlKSNS 97
                    568*******************************945543 PP

Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MAASSPAATK STSDTTTTTA TTATATAAAA AAAAATPSPP LPFQRMDTPP KTQRGLNKPK  60
CIQCGNVARS RCPYRSCKSC CSKAQNPCHI HVLKSNSAYP EKTPTSSTPS SDQKATQASS  120
QATPLRVPSF RQLSNAFAQF DNLQVRSKKH LTIKDAVALN EWRFSKLKEF KDRNIEVENE  180
AFELYMQNIS LLEEVFSTKS IHEGSNEDEV SKPNPSSQED ETWMMTSDLK LTLRSDPVRT  240
DNSRKRIQQI VDQGIKKLQK CEADDGANDP DDQNKHGSRL NKLKTLWVER ASVLSDFVDK  300
LNKARSEEDL KSCLEMKARL YNQSIEQADR KVAETKDAEA LTKQGAENDV TPRKVADYLL  360
PKLFTPIVID QETINKVDVH FSSLEQIEDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.17e-95SRS family protein