PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021297072.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | SRS | ||||||||
Protein Properties | Length: 390aa MW: 43354.7 Da PI: 7.9423 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 24.2 | 9.7e-08 | 58 | 97 | 5 | 43 |
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv.kstW 43 + +C +CGn a+ C ++ C+ CC C+ hv ks XP_021297072.1 58 KPKCIQCGNVARSRCPYRSCKSCCSKAQNPCHIHVlKSNS 97 568*******************************945543 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence |
MAASSPAATK STSDTTTTTA TTATATAAAA AAAAATPSPP LPFQRMDTPP KTQRGLNKPK 60 CIQCGNVARS RCPYRSCKSC CSKAQNPCHI HVLKSNSAYP EKTPTSSTPS SDQKATQASS 120 QATPLRVPSF RQLSNAFAQF DNLQVRSKKH LTIKDAVALN EWRFSKLKEF KDRNIEVENE 180 AFELYMQNIS LLEEVFSTKS IHEGSNEDEV SKPNPSSQED ETWMMTSDLK LTLRSDPVRT 240 DNSRKRIQQI VDQGIKKLQK CEADDGANDP DDQNKHGSRL NKLKTLWVER ASVLSDFVDK 300 LNKARSEEDL KSCLEMKARL YNQSIEQADR KVAETKDAEA LTKQGAENDV TPRKVADYLL 360 PKLFTPIVID QETINKVDVH FSSLEQIEDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32730.1 | 7e-95 | SRS family protein |