PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297042.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family SRS
Protein Properties Length: 280aa    MW: 29824.1 Da    PI: 8.4245
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702186.11.4e-57802406153
          DUF702   6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkrelkskkqsalsstklssa 94 
                     + C+dCGn+akk+C ++RCRtCCksrg+dCathv+stWvpaa+r++r+           +        ++   kr+r l+s+++ ++ss  +s++
  XP_021297042.1  80 KVCRDCGNRAKKECGYSRCRTCCKSRGYDCATHVRSTWVPAARRKDRKVVVLGDDGGGGSGGggssgsSSCGGKRPRVLNSTSNGTSSSNAVSKS 174
                     57*********************************************877665544443333555555566678888876666665555555544 PP

          DUF702  95 eskkeletss........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                      +  e  ts+        lP +v+++a+frc++v++++dge+e+aYq++v+i+GhvfkG+LydqG++
  XP_021297042.1 175 LNF-EAGTSHqdsrfkesLPGQVRAPALFRCIQVTAISDGEAEIAYQATVNISGHVFKGFLYDQGVD 240
                     332.22222234566667***********************************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MLGLHNIFLI APPPSQQNQQ QPTPPQPPPP PTPAQAFNQD YNLSDTNFWT LRKSTTQESP  60
VCQKKDGVLS SVEDGDGCFK VCRDCGNRAK KECGYSRCRT CCKSRGYDCA THVRSTWVPA  120
ARRKDRKVVV LGDDGGGGSG GGGSSGSSSC GGKRPRVLNS TSNGTSSSNA VSKSLNFEAG  180
TSHQDSRFKE SLPGQVRAPA LFRCIQVTAI SDGEAEIAYQ ATVNISGHVF KGFLYDQGVD  240
VKNAFPCISK MLFDSSSSGR DRDSSSPNVD PPNTFAASGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.17e-51SRS family protein