PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021297042.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | SRS | ||||||||
Protein Properties | Length: 280aa MW: 29824.1 Da PI: 8.4245 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 186.1 | 1.4e-57 | 80 | 240 | 6 | 153 |
DUF702 6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkrelkskkqsalsstklssa 94 + C+dCGn+akk+C ++RCRtCCksrg+dCathv+stWvpaa+r++r+ + ++ kr+r l+s+++ ++ss +s++ XP_021297042.1 80 KVCRDCGNRAKKECGYSRCRTCCKSRGYDCATHVRSTWVPAARRKDRKVVVLGDDGGGGSGGggssgsSSCGGKRPRVLNSTSNGTSSSNAVSKS 174 57*********************************************877665544443333555555566678888876666665555555544 PP DUF702 95 eskkeletss........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 + e ts+ lP +v+++a+frc++v++++dge+e+aYq++v+i+GhvfkG+LydqG++ XP_021297042.1 175 LNF-EAGTSHqdsrfkesLPGQVRAPALFRCIQVTAISDGEAEIAYQATVNISGHVFKGFLYDQGVD 240 332.22222234566667***********************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MLGLHNIFLI APPPSQQNQQ QPTPPQPPPP PTPAQAFNQD YNLSDTNFWT LRKSTTQESP 60 VCQKKDGVLS SVEDGDGCFK VCRDCGNRAK KECGYSRCRT CCKSRGYDCA THVRSTWVPA 120 ARRKDRKVVV LGDDGGGGSG GGGSSGSSSC GGKRPRVLNS TSNGTSSSNA VSKSLNFEAG 180 TSHQDSRFKE SLPGQVRAPA LFRCIQVTAI SDGEAEIAYQ ATVNISGHVF KGFLYDQGVD 240 VKNAFPCISK MLFDSSSSGR DRDSSSPNVD PPNTFAASGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12330.1 | 7e-51 | SRS family protein |