PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296687.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GRAS | ||||||||
Protein Properties | Length: 418aa MW: 46458 Da PI: 7.7958 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 327.1 | 3.4e-100 | 37 | 417 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lLl cA++ ssg+l++a+++L ++s las +gd++qRl f+ ALa rl++ +++l kal+ ++ + +e a l+ ++P+l +s+ XP_021296687.1 37 LIQLLLICAKHASSGNLHRADECLRQISLLASVSGDSIQRLSVRFASALAIRLVKRWPGLHKALNYTQLT---KQEFDDAKPLLGRAFPYLGLSY 128 689******************************************************************9...5666677899************ PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 + +++ +a+ ge+ +H +D++ + W++Ll++L++ p+gpp+l++T +++ +k + ++g rL k Ae+l + f+fn+l +l++l+ XP_021296687.1 129 AIITRTLIKAMMGERVIHLVDMGSGDVNLWVPLLRTLSCMPDGPPHLKVTCMNA----NKAVVDKLGARLVKEAEALAMAFQFNPL-NVSLKELT 218 ******************************************************....99*************************5.889***** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrll...............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270 ++L+v++gEala ++l+lh ll + + +++ ++L +++sl Pkv+ vveqeadhn +++++rf+e l+yysa+fds XP_021296687.1 219 SDMLKVRSGEALAFISILSLHALLaeddrvdahfgdnrnINGIKNSKQMCHFLTMIRSLWPKVLLVVEQEADHNLNRLVDRFMEGLHYYSAVFDS 313 ***********************************9987344444446778******************************************** PP GRAS 271 leaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkd 364 ++a ++ +s er+ +E + +g+ei+n+vaceg er+erhe+ ++W rl++aGFkpv++ ++ +++akl+++ ++dgy++ + +++ +++W+d XP_021296687.1 314 IDAAFGGTSsGERHALEGM-FGKEIENIVACEGVEREERHERHGRWMVRLGQAGFKPVQIWYDSMEDAKLMVEASGKDGYKIVQGKAASMICWHD 407 *999999887999999999.*************************************************************************** PP GRAS 365 rpLvsvSaWr 374 rpL++vSaW+ XP_021296687.1 408 RPLYAVSAWT 417 *********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MTTSSPAPGP EVSLSLTLLP CPTPLEALKP EERGIRLIQL LLICAKHASS GNLHRADECL 60 RQISLLASVS GDSIQRLSVR FASALAIRLV KRWPGLHKAL NYTQLTKQEF DDAKPLLGRA 120 FPYLGLSYAI ITRTLIKAMM GERVIHLVDM GSGDVNLWVP LLRTLSCMPD GPPHLKVTCM 180 NANKAVVDKL GARLVKEAEA LAMAFQFNPL NVSLKELTSD MLKVRSGEAL AFISILSLHA 240 LLAEDDRVDA HFGDNRNING IKNSKQMCHF LTMIRSLWPK VLLVVEQEAD HNLNRLVDRF 300 MEGLHYYSAV FDSIDAAFGG TSSGERHALE GMFGKEIENI VACEGVEREE RHERHGRWMV 360 RLGQAGFKPV QIWYDSMEDA KLMVEASGKD GYKIVQGKAA SMICWHDRPL YAVSAWTC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 2e-99 | GRAS family protein |