PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296038.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 134aa    MW: 15694.1 Da    PI: 9.5074
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.48e-16592190
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsef 90
                    f k+l   d+  ++rl++p ++++++  +k  s+ +++ede+g+ W++k+++r+++    v+ +GW +Fv+   L+ gD v F+ d+ + +
  XP_021296038.1  5 FSKQL--TDTDLKKRLSIPIQCLNHFRFDKGHSTSVQVEDENGKAWQFKCRVRRNGYPkPVFCEGWLKFVRYTSLRPGDRVEFYKDS-KAE 92
                    77888..56666678********88888889999****************77333332589999********************433.444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MEKMFSKQLT DTDLKKRLSI PIQCLNHFRF DKGHSTSVQV EDENGKAWQF KCRVRRNGYP  60
KPVFCEGWLK FVRYTSLRPG DRVEFYKDSK AEDPFIYAAP AFMIPCFGFH RICGAIYAAS  120
PDRFWHPTPP PLLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.17e-10B3 family protein