PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021295761.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | C2H2 | ||||||||
Protein Properties | Length: 184aa MW: 20207.2 Da PI: 8.9198 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.8 | 0.0016 | 45 | 67 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H XP_021295761.1 45 FECKTCNRQFPSFQALGGHRASH 67 89**********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MKRSFSDRSE VENSFALANC LMLLSQGGGN KYEHVVDNSI PSRVFECKTC NRQFPSFQAL 60 GGHRASHKKP RLTEGDGSME NQPPAKPKTH ECSICGLEFA IGQALGGHMR RHRAGLSENS 120 HQHGPLSLSN KPVVMPPIVK KSNSRRVLCL DLNLTPLEND LELFKLGKAA PPAIDCLFYA 180 LPST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 8e-44 | C2H2 family protein |