PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021295664.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GRAS | ||||||||
Protein Properties | Length: 737aa MW: 83395 Da PI: 5.779 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 397.8 | 1.1e-121 | 363 | 733 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL+ A+av+++d + a++lL+++++++sp gd mqR+a+yf+ +L+arla+s++++y al +++ts +++l+a++lf ++P+ k+s+ XP_021295664.1 363 LRTLLTLSAQAVATDDRRSANELLKQIRQHSSPMGDGMQRMAHYFADGLEARLAGSGTQIYTALITKPTS---AADVLKAYHLFLAACPFRKLSN 454 57899999**********************************************************9999...9********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 + N++I++ +e++ r+HiiDf+i +G+QWp+L++ L+sRp+gpp+lRiTg++ p++g +e++eetg rLa++Ae+++vpfef++ +a+++++ XP_021295664.1 455 FFSNKTIMNLAENAPRLHIIDFGILYGFQWPCLIRRLSSRPGGPPKLRITGIDLPQPGfrPAERVEETGLRLANYAETFKVPFEFHA-IAQKWDT 548 *********************************************************9*****************************.7****** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 +++e+Lr++++E+l+Vn++++l +llde+v +es+r++vL+lv++++P+v+++ + +n++ F +rf eal +ys+lfd+le+++pre er+ XP_021295664.1 549 IQIEDLRIDSDEVLVVNCMYRLRNLLDETVVVESPRNKVLNLVRKMNPDVFILGIVNGACNAPFFITRFREALFHYSTLFDMLETNVPREIPERM 643 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 +Ere++g+e++nv+acegaer+er et+++W+ r+++a ++++pl+e+++k+ak + +++ + + ++e++ +l++gWk+r ++++S+W XP_021295664.1 644 LIEREIFGWEAMNVIACEGAERIERLETYKQWQVRISRARLRQLPLNEEIMKTAKERVDTCYHKDFVIDEDNRWLLQGWKGRIVYALSSW 733 **************************************************************889************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 737 aa Download sequence |
MDRSLKELYS SVDRFRVNDD TVLALSGRNF DDKFQKETYV DIPPLQPAPM LRNLAPSSSV 60 NEEGDSHEDY DFSDVVLKYI NQMLMEEDME DKTCMFKESS AALQAAEKSF YEVLGQRYPP 120 SPKYELKPFT DQNQESFDDS RDQSCWRCSS ASISSSSSNL VDLGCNHDLG EQRSSSFASQ 180 ANSQSSHSSG NSTGSGLDGF VDSPVSTLRL PEIFSDSESA MQFRKGFEEA SRFLPNGRSL 240 FVDVESDGLF LKEVKEEAKG VVDKAEKNEF SQNGSRGKKN PYPEDVNLES GRSNKQSAVY 300 TESTVSSEMF DKVLLNCQSV TDLRKALQDE TSKNVQHNGQ LKGTTGGKAR GKKQASKRNV 360 VDLRTLLTLS AQAVATDDRR SANELLKQIR QHSSPMGDGM QRMAHYFADG LEARLAGSGT 420 QIYTALITKP TSAADVLKAY HLFLAACPFR KLSNFFSNKT IMNLAENAPR LHIIDFGILY 480 GFQWPCLIRR LSSRPGGPPK LRITGIDLPQ PGFRPAERVE ETGLRLANYA ETFKVPFEFH 540 AIAQKWDTIQ IEDLRIDSDE VLVVNCMYRL RNLLDETVVV ESPRNKVLNL VRKMNPDVFI 600 LGIVNGACNA PFFITRFREA LFHYSTLFDM LETNVPREIP ERMLIEREIF GWEAMNVIAC 660 EGAERIERLE TYKQWQVRIS RARLRQLPLN EEIMKTAKER VDTCYHKDFV IDEDNRWLLQ 720 GWKGRIVYAL SSWVSAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 0.0 | GRAS family protein |