PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295664.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GRAS
Protein Properties Length: 737aa    MW: 83395 Da    PI: 5.779
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS397.81.1e-1213637331373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+  A+av+++d + a++lL+++++++sp gd mqR+a+yf+ +L+arla+s++++y al +++ts    +++l+a++lf  ++P+ k+s+
  XP_021295664.1 363 LRTLLTLSAQAVATDDRRSANELLKQIRQHSSPMGDGMQRMAHYFADGLEARLAGSGTQIYTALITKPTS---AADVLKAYHLFLAACPFRKLSN 454
                     57899999**********************************************************9999...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +  N++I++ +e++ r+HiiDf+i +G+QWp+L++ L+sRp+gpp+lRiTg++ p++g   +e++eetg rLa++Ae+++vpfef++ +a+++++
  XP_021295664.1 455 FFSNKTIMNLAENAPRLHIIDFGILYGFQWPCLIRRLSSRPGGPPKLRITGIDLPQPGfrPAERVEETGLRLANYAETFKVPFEFHA-IAQKWDT 548
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+Lr++++E+l+Vn++++l +llde+v +es+r++vL+lv++++P+v+++   +  +n++ F +rf eal +ys+lfd+le+++pre  er+
  XP_021295664.1 549 IQIEDLRIDSDEVLVVNCMYRLRNLLDETVVVESPRNKVLNLVRKMNPDVFILGIVNGACNAPFFITRFREALFHYSTLFDMLETNVPREIPERM 643
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      +Ere++g+e++nv+acegaer+er et+++W+ r+++a ++++pl+e+++k+ak  + +++ + + ++e++ +l++gWk+r ++++S+W
  XP_021295664.1 644 LIEREIFGWEAMNVIACEGAERIERLETYKQWQVRISRARLRQLPLNEEIMKTAKERVDTCYHKDFVIDEDNRWLLQGWKGRIVYALSSW 733
                     **************************************************************889************************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    
MDRSLKELYS SVDRFRVNDD TVLALSGRNF DDKFQKETYV DIPPLQPAPM LRNLAPSSSV  60
NEEGDSHEDY DFSDVVLKYI NQMLMEEDME DKTCMFKESS AALQAAEKSF YEVLGQRYPP  120
SPKYELKPFT DQNQESFDDS RDQSCWRCSS ASISSSSSNL VDLGCNHDLG EQRSSSFASQ  180
ANSQSSHSSG NSTGSGLDGF VDSPVSTLRL PEIFSDSESA MQFRKGFEEA SRFLPNGRSL  240
FVDVESDGLF LKEVKEEAKG VVDKAEKNEF SQNGSRGKKN PYPEDVNLES GRSNKQSAVY  300
TESTVSSEMF DKVLLNCQSV TDLRKALQDE TSKNVQHNGQ LKGTTGGKAR GKKQASKRNV  360
VDLRTLLTLS AQAVATDDRR SANELLKQIR QHSSPMGDGM QRMAHYFADG LEARLAGSGT  420
QIYTALITKP TSAADVLKAY HLFLAACPFR KLSNFFSNKT IMNLAENAPR LHIIDFGILY  480
GFQWPCLIRR LSSRPGGPPK LRITGIDLPQ PGFRPAERVE ETGLRLANYA ETFKVPFEFH  540
AIAQKWDTIQ IEDLRIDSDE VLVVNCMYRL RNLLDETVVV ESPRNKVLNL VRKMNPDVFI  600
LGIVNGACNA PFFITRFREA LFHYSTLFDM LETNVPREIP ERMLIEREIF GWEAMNVIAC  660
EGAERIERLE TYKQWQVRIS RARLRQLPLN EEIMKTAKER VDTCYHKDFV IDEDNRWLLQ  720
GWKGRIVYAL SSWVSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein