PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021295500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NF-YB | ||||||||
Protein Properties | Length: 195aa MW: 21023.5 Da PI: 5.05 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 184 | 1.2e-57 | 46 | 142 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy+eplkvyl +yreleg XP_021295500.1 46 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLGRYRELEG 140 69********************************************************************************************* PP NF-YB 96 ek 97 ++ XP_021295500.1 141 DT 142 97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MYGWMCAFGD LGFFGDMADG MQAGPTSPAG GSHESGGEQS SPHSNVREQD RYLPIANISR 60 IMKKALPANG KIAKDAKDTV QECVSEFISF ITSEASDKCQ KEKRKTINGD DLLWAMATLG 120 FEDYIEPLKV YLGRYRELEG DTKGSARGGD GSLKRDAAGA LAAQNAQFAI QGSLNYITSQ 180 AQGQHMIVPS MQGNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37060.1 | 2e-73 | NF-YB family protein |