PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295453.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 291aa    MW: 32608.6 Da    PI: 6.9441
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.000215577123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_021295453.1 55 YSCSFCRREFRSAQALGGHMNVH 77
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MEQAQYWTWM RRRRILKPHF QVSMNSLSEY SWEEKAFAED AAGSLEGCIW PPRSYSCSFC  60
RREFRSAQAL GGHMNVHRRD RARLTQSALS SQNEVVVPHH QNHKQISLKS SNDPKILPHQ  120
AGTLDSTDDL DHNSVPSTFS ASRVLALSTQ ENFSTTSPVQ EQHKGQLHGS DSTTKSCFNN  180
IFSDSKLEAE KSIKLAWGAD SVCLDSDDDH VETNLSVGLN PVFSQNRPTV ITCGEEAISC  240
KRPKITVSAL PFIVSKETYS PHKWQVLGLE PVGSMEDLDL ELRLGVLPKV K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.15e-30C2H2 family protein