PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295251.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 146aa    MW: 16491.7 Da    PI: 10.4032
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295251.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY39.41.2e-12106139134
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT--- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpv 34 
                     ldDgy+WrKYGqK vk+++fpr   r  + +C  
  XP_021295251.1 106 LDDGYRWRKYGQKAVKNNKFPRIEVRQLHIQCFR 139
                     59********************877777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MENFQGFSPN SSTLSASSLS LNMTNSLGYA EFQGNKANGL LGLMAEMEGP ASLNVHNISQ  60
NKTFPEINSL AGTETETDVK FGKKKADKKI RKPRYAFQTR SQVDILDDGY RWRKYGQKAV  120
KNNKFPRIEV RQLHIQCFRV KNKDAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-20WRKY family protein