PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295043.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YA
Protein Properties Length: 300aa    MW: 32932.6 Da    PI: 8.1904
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295043.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1025.6e-32141197158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVNaKQy++Il+RRq Rakle+++kl +k rkpylheSRh hAl+R+Rg+gGrF
  XP_021295043.1 141 DEPIYVNAKQYRAILRRRQFRAKLEAQNKL-IKVRKPYLHESRHLHALKRARGNGGRF 197
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGVLPQQFHN TKQLSFQFQD QDSSSTQSTG QSYPEVASAG DSNIYGQSLI SASSGGNETH  60
GNLFGGHAKL ASSLGTQDCF FPPSRVDHNK STAHIPLHYA EPYFGGAVAA AYGLQAVQIH  120
HHHMMAMLPA RVPLPLDLTE DEPIYVNAKQ YRAILRRRQF RAKLEAQNKL IKVRKPYLHE  180
SRHLHALKRA RGNGGRFLNK TKFQESEHIP SSHGLDMSRS TQLDLSAKIS ESEVHQVENY  240
KDATSTTSCS EVTSASNSDE MFQQPDFRFS GYPSHNGGAL QGHGGNMHGG GNLHHLSGLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.15e-68NF-YA family protein