PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294996.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family BES1
Protein Properties Length: 327aa    MW: 35103.8 Da    PI: 8.651
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822218.61.4e-6721471150
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp ++++++g sasasp+ss++
  XP_021294996.1   2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVDRMDIVGGSASASPCSSYH 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsssl 150
                             +sp++sy++sp+sssfpsp+s+  +s+a+     +sl+p+l++ls++sss+
  XP_021294996.1  97 --------PSPCASYNPSPASSSFPSPASSHYTSNANGngdaNSLIPWLKNLSSSSSSA 147
                     ........********************99999887768899**********9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEEDGTTY RKGCKPVDRM DIVGGSASAS PCSSYHPSPC ASYNPSPASS SFPSPASSHY  120
TSNANGNGDA NSLIPWLKNL SSSSSSASSK LAHHLYIAGG SISAPVTPPL SSPTSRTPRT  180
RNDWDERTAG SAWAGQRYSY LPSSTPPSPS RQGFPDSGWL SRLEIPQSGP TSPTFSLVSR  240
NPFGFKDETL SGGGSRMWTP GQSGTCSPAF PAGVDQTSDV PMSDAIAAEF AFGSNVTGLV  300
KPWEGEKIHE ECVADDLELT LGNSKSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-106BES1 family protein