PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294869.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 312aa    MW: 33355.8 Da    PI: 6.7064
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.000481839223
                    EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                    +C +C+k+F++   L  H+r H
  XP_021294869.1 18 SCFYCNKVFNNYRALGGHLRIH 39
                    6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MNFLLAREGA EKHAGTKSCF YCNKVFNNYR ALGGHLRIHQ EDKTSRTLNY PGRSSNSMDI  60
TRNPPVLLPN SQQNSSGGGN NPTPFSRAPP PFDFSRMFYS NEINQASRSK YTGSNPGVSQ  120
TQFIMSSDLS YGCGSGSTHH SLASRAFASA GANAVMSPAA FASSGSVVAT GFPTDSSSYL  180
GTNGGCQFNT DEFRISRDGL PPSSGDALLN VQGYNLSPHP CSSVDKVGQY DRRSLLTCEE  240
GKRPYLADGS GGADVMNGSK KPRIAPTEHV EPKNPQKKEL SLFMDVDDSI SASETCGAEE  300
EGPVDVDLSL HL