PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021294717.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HSF | ||||||||
Protein Properties | Length: 193aa MW: 22340.3 Da PI: 8.3379 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 106.1 | 2.9e-33 | 19 | 119 | 2 | 103 |
HHHHHHHHHC........TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS HSF_DNA-bind 2 Flkklyeile........deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 Fl k+y +le ++ k+++sw+++g+ fvv+ + ef++ Lp+yFkh+nf+SF+RQLn+YgFkk+++++ weFkh++F++ XP_021294717.1 19 FLWKTYALLEegeegaetADHSKKIVSWNAEGTGFVVWSPAEFSELTLPRYFKHNNFSSFIRQLNTYGFKKTSSKR---------WEFKHEKFQR 104 99********6666665555999*************************************************9998.........********** PP XXXXXXXXXXXXXXX CS HSF_DNA-bind 89 gkkellekikrkkse 103 g k+ll +i rkk+e XP_021294717.1 105 GCKHLLVEITRKKTE 119 ************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MSKITTSSLS PRTKGAAPFL WKTYALLEEG EEGAETADHS KKIVSWNAEG TGFVVWSPAE 60 FSELTLPRYF KHNNFSSFIR QLNTYGFKKT SSKRWEFKHE KFQRGCKHLL VEITRKKTEP 120 SVFPAFLKAS DEDNANHVEE NSCQTLLEEN EILRREKEEL QTQIAQFKAL EIKLLDCLAQ 180 HMGNTNHKER RLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 6e-34 | HSF family protein |