PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021294716.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HSF | ||||||||
Protein Properties | Length: 194aa MW: 22468.4 Da PI: 8.3379 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 98.9 | 5e-31 | 19 | 120 | 2 | 103 |
HHHHHHHHHC........TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT.TEEE---SSBTTTTXTTSEEEEESXXX CS HSF_DNA-bind 2 Flkklyeile........deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY.gFkkvkdeekkskskekiweFkhksFk 87 Fl k+y +le ++ k+++sw+++g+ fvv+ + ef++ Lp+yFkh+nf+SF+RQLn+Y gFkk+++++ weFkh++F+ XP_021294716.1 19 FLWKTYALLEegeegaetADHSKKIVSWNAEGTGFVVWSPAEFSELTLPRYFKHNNFSSFIRQLNTYqGFKKTSSKR---------WEFKHEKFQ 104 99********6666665555999********************************************88**999988.........********* PP XXXXXXXXXXXXXXXX CS HSF_DNA-bind 88 kgkkellekikrkkse 103 +g k+ll +i rkk+e XP_021294716.1 105 RGCKHLLVEITRKKTE 120 *************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MSKITTSSLS PRTKGAAPFL WKTYALLEEG EEGAETADHS KKIVSWNAEG TGFVVWSPAE 60 FSELTLPRYF KHNNFSSFIR QLNTYQGFKK TSSKRWEFKH EKFQRGCKHL LVEITRKKTE 120 PSVFPAFLKA SDEDNANHVE ENSCQTLLEE NEILRREKEE LQTQIAQFKA LEIKLLDCLA 180 QHMGNTNHKE RRLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 4e-32 | HSF family protein |