PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021294565.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Dof

Protein Properties

Length: 350aa MW: 38769.3 Da PI: 9.2943

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021294565.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	114.8	3.7e-36	87	144	2	59
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 +++ lkcprCdstntkfCyynny+ sqPr+fCk+C+r+WtkGG+lrnvPvGggr++++ XP_021294565.1 87 QSEPLKCPRCDSTNTKFCYYNNYNKSQPRHFCKTCKRHWTKGGTLRNVPVGGGRKNKR 144 57889***********************************************976665 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MEKSGMKTDW VPLASKEWRG SKHAHFSSPS REFPCIRHAP LSNRFKTSHC LAYKEESHHP 60 VLLQAQTLEL PKASPAKRQQ PQNQQQQSEP LKCPRCDSTN TKFCYYNNYN KSQPRHFCKT 120 CKRHWTKGGT LRNVPVGGGR KNKRLKTSNS STAATAPAST STASAIKSST AAGVNNRLNT 180 FMAIQPQQQR QDLQLPLADQ KNISNIQFQA LSRPPSSLLQ QNSINCSNLD GESFSTSNGV 240 FLGSTLPLPP TQGLQFPFSS SSSSSFDTTR SSISTSFQSS TIYNCTGETM EDPTITSVIM 300 PTTSGTFSQP WQVPITSGGM DMTNYWNWDD IDALVSTDLN MPWDDSEIKP

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MEKSGMKTDW VPLASKEWRG SKHAHFSSPS REFPCIRHAP LSNRFKTSHC LAYKEESHHP  60
VLLQAQTLEL PKASPAKRQQ PQNQQQQSEP LKCPRCDSTN TKFCYYNNYN KSQPRHFCKT  120
CKRHWTKGGT LRNVPVGGGR KNKRLKTSNS STAATAPAST STASAIKSST AAGVNNRLNT  180
FMAIQPQQQR QDLQLPLADQ KNISNIQFQA LSRPPSSLLQ QNSINCSNLD GESFSTSNGV  240
FLGSTLPLPP TQGLQFPFSS SSSSSFDTTR SSISTSFQSS TIYNCTGETM EDPTITSVIM  300
PTTSGTFSQP WQVPITSGGM DMTNYWNWDD IDALVSTDLN MPWDDSEIKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.2	3e-29	Dof family protein