PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021294218.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NF-YB | ||||||||
Protein Properties | Length: 186aa MW: 20229.4 Da PI: 6.3953 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 187.2 | 1.2e-58 | 23 | 118 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedyveplkvyl+k+re+ege XP_021294218.1 23 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLHKFREMEGE 117 89********************************************************************************************9 PP NF-YB 97 k 97 + XP_021294218.1 118 R 118 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MADSDNDSGG HNNSNANNEL SPREQDRFLP IANVSRIMKK ALPANAKISK DAKETVQECV 60 SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFEDY VEPLKVYLHK FREMEGERTA 120 LGRQPTDQRD GSSADDSTNA AAGGAFAGPA MYGGMQSTMM LMGHHHHQSH MYGSGTGSGA 180 SSGRPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47640.1 | 5e-71 | NF-YB family protein |