PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293715.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NF-YB | ||||||||
Protein Properties | Length: 230aa MW: 25495.6 Da PI: 6.677 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 175.5 | 5.4e-55 | 65 | 161 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl+vyl++yreleg XP_021293715.1 65 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTVYLHRYRELEG 159 69********************************************************************************************* PP NF-YB 96 ek 97 e+ XP_021293715.1 160 ER 161 97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MERGGFHGYR KLPNNTTSDV STAFIVVVYF IGYGSGLKVP EMNMRTADVN HTNNYSNSDD 60 NECTVREQDR FMPIANVIRI MRKILPPHAK ISDDAKETIQ ECVSEYISFI TGEANERCQR 120 EQRKTITAED VLWAMSKLGF DDYIEPLTVY LHRYRELEGE RGSIRGEPLG KRAVDYGALS 180 VAAFAPAFHM GHHHGFFGGG GAMGGYLKDA SNAGSSQAAV ANGEPFGHHK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.1 | 1e-82 | NF-YB family protein |