PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293346.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | YABBY | ||||||||
Protein Properties | Length: 218aa MW: 24256.5 Da PI: 6.7034 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 219.8 | 7.9e-68 | 6 | 169 | 2 | 166 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesa 92 ++f+ +eq+CyvqC+fC+til+vsvP +sl +vvtvrCGhC+sllsvn++kas ql l+++ +e +e ee + ++ +++ XP_021293346.1 6 HLFDLPEQICYVQCGFCTTILLVSVPCSSLAMVVTVRCGHCSSLLSVNMMKASfvplQL---LASLGHDHDDEPKEGAVCEEVAAPRKTAAHR-- 95 7899*********************************************9998433333...3344444444444444333333333333333.. PP YABBY 93 stsvssekl...senedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPki 166 +s +l s+ne+e++ rv p v++PPekrqr+Psaynrfikeei+r+ka+nP+i h+eafs+aaknWahfP++ XP_021293346.1 96 ----RSPSLvtsSDNEEEDIVRVNPtVNKPPEKRQRAPSAYNRFIKEEIRRLKAQNPNIPHKEAFSTAAKNWAHFPPM 169 ....22223333899999****9888**************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MSTLNHLFDL PEQICYVQCG FCTTILLVSV PCSSLAMVVT VRCGHCSSLL SVNMMKASFV 60 PLQLLASLGH DHDDEPKEGA VCEEVAAPRK TAAHRRSPSL VTSSDNEEED IVRVNPTVNK 120 PPEKRQRAPS AYNRFIKEEI RRLKAQNPNI PHKEAFSTAA KNWAHFPPMD TKGDGESCGL 180 DEGEALWNSD ATQVHIQGND FRERKAARNS IWVKTPFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 1e-84 | YABBY family protein |