PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293283.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | YABBY | ||||||||
Protein Properties | Length: 173aa MW: 19173.9 Da PI: 8.9602 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 151.9 | 5.7e-47 | 9 | 157 | 1 | 163 |
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 +d++ +se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l ++ + l+ + ++++ +e++++ s k +s+s s XP_021293283.1 9 MDLVPQSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTR---------PPLQGQCLDPQTSLSLQEKQSFCSDFRKVQSPSPS 94 578899*************************************98553333.........33444444444444444555555555444444443 PP YABBY 96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 s++++ ++p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + XP_021293283.1 95 S-----STSSEPSSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 157 3.....345677899999************************************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MNLEEKVGMD LVPQSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP 60 PLQGQCLDPQ TSLSLQEKQS FCSDFRKVQS PSPSSSTSSE PSSPKAPFVV KPPEKKHRLP 120 SAYNRFMKEE IQRIKAANPE IPHREAFSAA AKNWARYIPN SPAAPVSGSR NNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 6e-72 | YABBY family protein |