PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293113.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 240aa MW: 27665.3 Da PI: 7.1002 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.6 | 1.3e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELS+LCdaevaviifs++gklye++s XP_021293113.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVAVIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 97.6 | 1.8e-32 | 82 | 173 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++e++++s++qe+ kLk+++e Lqr+qRh+lGedL++L keL+qLe+qL+ slk+i s K++++l+q+ elq+ke+ l e+n++Lr+klee XP_021293113.1 82 QTESDTQSSYQEYLKLKAKVEVLQRSQRHFLGEDLGDLCSKELEQLEHQLDFSLKQIGSSKMHFMLDQLVELQRKEEILLETNRNLRRKLEE 173 68999************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSILCD AEVAVIIFSN RGKLYEFCST 60 FSMAKTLERY HRCTYGTLEP GQTESDTQSS YQEYLKLKAK VEVLQRSQRH FLGEDLGDLC 120 SKELEQLEHQ LDFSLKQIGS SKMHFMLDQL VELQRKEEIL LETNRNLRRK LEESTSTLRL 180 SWETGEQSNP YNHHQLPQSE GFFEPLQCSS SMQIGYNPTA TDQDTAAASA PNGFIPGWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 5e-95 | MIKC_MADS family protein |