PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021292203.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Dof

Protein Properties

Length: 306aa MW: 33694.7 Da PI: 6.8781

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021292203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.9	3e-40	51	111	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+ XP_021292203.1 51 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA 111 6899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MGLTSLQVCM DSSDWLQGTI HEESGMDSSS PSGDMLACSR PLIERRLRPP HDQALKCPRC 60 DSTHTKFCYY NNYSLSQPRY FCKTCRRYWT KGGTLRNIPV GGGCRKNKKV ASKKSNDQSA 120 NSNNPGSSSH NPTDLHLSFP EMHLSHLNNM LGTHGPNNNF MESKYNSLLE NPRPIDFMES 180 KLEAIVGSSR NYDFMGNGEL GMVGGLGDMG HGLAPNLHGL CSPYGMSLDG NGGTFLDTCQ 240 RIMLPYDANE DQHAVDVKPN TKLLSLDWQD QGCSDAGKDT YGYLNNLGSW SGMMNNYGPS 300 TTNPLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	1e-50	Dof family protein