PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291963.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | C2H2 | ||||||||
Protein Properties | Length: 228aa MW: 25798.1 Da PI: 7.7317 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.2 | 0.00027 | 61 | 83 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C k F+++ L H++ H XP_021291963.1 61 YECQFCLKKFTNSQALGGHQNAH 83 99******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MGKEQLRLFG FEMSFHDGDE NQPGRSEEVK DSGKSLENIL SKVGKTVKEK SVTKKLEKRK 60 YECQFCLKKF TNSQALGGHQ NAHKSERLKK RRMQLQAKST NLSFADEPPH DYCGVTQHCS 120 LPSSDSWSPS VPECTLFKEF LINFKTTFDQ DQSLYCNLAD FCHSIPLPSH HNHLEEDTCG 180 RHIVIKPSPS YISEDCESLY TRLGLAPPAI HSSSRNGTML ELGKCREG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06650.1 | 4e-11 | C2H2 family protein |