PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291670.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 328aa    MW: 36329 Da    PI: 4.8617
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.3e-184997355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  XP_021291670.1 49 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 97
                    56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MSTSKTLDKP FGYEPVQTQA GFALLQRNTS PSQPGERRGR RKQAEPGRFL GVRRRPWGRY  60
AAEIRDPTTK ERHWLGTFDT AQEAALAYDR AALSMKGTQA RTNFLYSNNT TFHSLLNPFD  120
VQSILPTSEF LTSSQPKQAT NHNSAPQPDI SHSKAPIQSN NDPSSADETP YGSVDDNSFF  180
LSSDTNSGYL ACIVPDNCLK PPSTPTSPRV SNFCSMNQIS HENQSHFDNY ALPPDITSLP  240
KSDNMEFPGF DELNQGFWSD QRSWDMNSNE LSAMINPPLM VEDGCMGAFY PYNDSASYNM  300
IPQATSSVTC SPSVPPFGDV VDLGYSLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.16e-66ERF family protein