PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291603.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | TCP | ||||||||
Protein Properties | Length: 349aa MW: 37393.8 Da PI: 6.5225 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 117.6 | 1.5e-36 | 90 | 187 | 4 | 104 |
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaaks 97 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++ +a ++ ++s + +s + ++ + ++ XP_021291603.1 90 PKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVsVNGSLKIPTS----SGKQDGDLPR 180 699***********************************************************9999955521111111111....1222222222 PP TCP 98 kksqksa 104 k++++++ XP_021291603.1 181 KRRKRPS 187 2222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MECNQNQTIE EIDERINNNA TIIINEEEEQ QSNNTTPSFS PSEATVMDPN QPMKEEDLTD 60 TEPREFTNST LVHGLVPVMP AAQINRSFVP KRPSKDRHTK VEGRGRRIRM PATCAARIFQ 120 LTRELGHKSD GETIRWLLEH AEPAIIEATG TGTVPAIAVS VNGSLKIPTS SGKQDGDLPR 180 KRRKRPSNSE FIDVNEHQSS VSSGLAPIAP VTFSSVNVNS QGLVPLWPMG TFGVLPAAAG 240 GAPASNQAQL WAIPATATPF FNVAGRPISS FVSAMQPEVQ GSSVGLMGSS GVPSSNSGTT 300 GGAGVSSSSN GNSNSTTQML RDFSLEILDK RELQFLGRPA NHQRPCSKP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 179 | 186 | PRKRRKRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51910.2 | 9e-82 | TCP family protein |