PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291466.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | CAMTA | ||||||||
Protein Properties | Length: 911aa MW: 103209 Da PI: 7.7865 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 165.8 | 7.1e-52 | 29 | 146 | 2 | 118 |
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ++e ++rwl+++ei+aiL n++ + ++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+++nptf XP_021291466.1 29 MEEaRSRWLRPNEIHAILCNHKYFPIHVKPMNLPKSGKIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPTFV 123 45669****************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rrcywlL+++le+ivlvhy+e++ XP_021291466.1 124 RRCYWLLDKTLEHIVLVHYRETQ 146 ********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 911 aa Download sequence |
MDGDRSGRLV GTEIHGFHTL EDLDVRNMME EARSRWLRPN EIHAILCNHK YFPIHVKPMN 60 LPKSGKIVLF DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGQDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQESQG SPATPVNSNS SSISDQSAPL LVTEEFDSGA 180 GNTNYEEPCG LTVRNHEMRL HEINTLEWDE LLGTNDTNDS TLSRRDKDSF FNQGSQIAAN 240 RFSNDGGHTS AYNLSAGISS LGNLTDPVTQ SNNACINYPE GICNQVSDGE VNSNVQRKDF 300 SVIGTGDSLD LLVNDGLQSQ DSFGRWINYI ITESPGSVDD PVPESSISSG QESITSPEQI 360 FSITDVSPAW AYTTERTKIL VTGVFHQAYQ HLVKSNLFCV CGDVCIPAEL IQVGVYRCLL 420 SEHSSGLVNL YMSLDGHKPI SQVLIFEYRA PVLHDLIPPL EDESRWEEFQ LQMRLAYLLF 480 STSKSLNILS GKVSPNTLKE AKKFALKTTN ISKSWAYLIK SIEENRVSFT QAKDSLLEIA 540 LKSRLKHWLL ERIIEGCKTT EYDAQGQGVL HLCAILGYTW AIYLFSWSGL SLDFRDKRGW 600 TALHWAAYYG REKMVAVLLS AGAKPNLVTD PTAQTPSGCT AAELASLKGY HGLAAYLSEE 660 ALVAQFNDMA VAGNASGSLE TSRTEATTRE NLNEDELYLK ETLAAYRTAA DAAARIHTAF 720 REHSLKMRTK AVQFSNPEDE ARNIVAALKI QHAFHNYEAR KKMTAAARIQ YRFRTWKIRK 780 DFLAMRRQAV KIQAAFRGFQ VRRQYRKIIW SVGVLEKAIL RWRLKRKGFR GLQVNTVEPV 840 GEPKQESVTE EDFYRTSRKQ AEERVEKAVV CVQSMFRSKK AQQEYQRMKM VHKLAMLEYE 900 SLLDPSSDMD A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16150.1 | 0.0 | CAMTA family protein |