PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021291465.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

CAMTA

Protein Properties

Length: 911aa MW: 103209 Da PI: 7.7865

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021291465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.8	7.1e-52	29	146	2	118
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ++e ++rwl+++ei+aiL n++ + ++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+++nptf XP_021291465.1 29 MEEaRSRWLRPNEIHAILCNHKYFPIHVKPMNLPKSGKIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPTFV 123 45669**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rrcywlL+++le+ivlvhy+e++ XP_021291465.1 124 RRCYWLLDKTLEHIVLVHYRETQ 146 ******************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 911 aa Download sequence
MDGDRSGRLV GTEIHGFHTL EDLDVRNMME EARSRWLRPN EIHAILCNHK YFPIHVKPMN 60 LPKSGKIVLF DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGQDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQESQG SPATPVNSNS SSISDQSAPL LVTEEFDSGA 180 GNTNYEEPCG LTVRNHEMRL HEINTLEWDE LLGTNDTNDS TLSRRDKDSF FNQGSQIAAN 240 RFSNDGGHTS AYNLSAGISS LGNLTDPVTQ SNNACINYPE GICNQVSDGE VNSNVQRKDF 300 SVIGTGDSLD LLVNDGLQSQ DSFGRWINYI ITESPGSVDD PVPESSISSG QESITSPEQI 360 FSITDVSPAW AYTTERTKIL VTGVFHQAYQ HLVKSNLFCV CGDVCIPAEL IQVGVYRCLL 420 SEHSSGLVNL YMSLDGHKPI SQVLIFEYRA PVLHDLIPPL EDESRWEEFQ LQMRLAYLLF 480 STSKSLNILS GKVSPNTLKE AKKFALKTTN ISKSWAYLIK SIEENRVSFT QAKDSLLEIA 540 LKSRLKHWLL ERIIEGCKTT EYDAQGQGVL HLCAILGYTW AIYLFSWSGL SLDFRDKRGW 600 TALHWAAYYG REKMVAVLLS AGAKPNLVTD PTAQTPSGCT AAELASLKGY HGLAAYLSEE 660 ALVAQFNDMA VAGNASGSLE TSRTEATTRE NLNEDELYLK ETLAAYRTAA DAAARIHTAF 720 REHSLKMRTK AVQFSNPEDE ARNIVAALKI QHAFHNYEAR KKMTAAARIQ YRFRTWKIRK 780 DFLAMRRQAV KIQAAFRGFQ VRRQYRKIIW SVGVLEKAIL RWRLKRKGFR GLQVNTVEPV 840 GEPKQESVTE EDFYRTSRKQ AEERVEKAVV CVQSMFRSKK AQQEYQRMKM VHKLAMLEYE 900 SLLDPSSDMD A

Sequence ? help Back to Top

Protein Sequence Length: 911 aa Download sequence

MDGDRSGRLV GTEIHGFHTL EDLDVRNMME EARSRWLRPN EIHAILCNHK YFPIHVKPMN  60
LPKSGKIVLF DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGQDNP  120
TFVRRCYWLL DKTLEHIVLV HYRETQESQG SPATPVNSNS SSISDQSAPL LVTEEFDSGA  180
GNTNYEEPCG LTVRNHEMRL HEINTLEWDE LLGTNDTNDS TLSRRDKDSF FNQGSQIAAN  240
RFSNDGGHTS AYNLSAGISS LGNLTDPVTQ SNNACINYPE GICNQVSDGE VNSNVQRKDF  300
SVIGTGDSLD LLVNDGLQSQ DSFGRWINYI ITESPGSVDD PVPESSISSG QESITSPEQI  360
FSITDVSPAW AYTTERTKIL VTGVFHQAYQ HLVKSNLFCV CGDVCIPAEL IQVGVYRCLL  420
SEHSSGLVNL YMSLDGHKPI SQVLIFEYRA PVLHDLIPPL EDESRWEEFQ LQMRLAYLLF  480
STSKSLNILS GKVSPNTLKE AKKFALKTTN ISKSWAYLIK SIEENRVSFT QAKDSLLEIA  540
LKSRLKHWLL ERIIEGCKTT EYDAQGQGVL HLCAILGYTW AIYLFSWSGL SLDFRDKRGW  600
TALHWAAYYG REKMVAVLLS AGAKPNLVTD PTAQTPSGCT AAELASLKGY HGLAAYLSEE  660
ALVAQFNDMA VAGNASGSLE TSRTEATTRE NLNEDELYLK ETLAAYRTAA DAAARIHTAF  720
REHSLKMRTK AVQFSNPEDE ARNIVAALKI QHAFHNYEAR KKMTAAARIQ YRFRTWKIRK  780
DFLAMRRQAV KIQAAFRGFQ VRRQYRKIIW SVGVLEKAIL RWRLKRKGFR GLQVNTVEPV  840
GEPKQESVTE EDFYRTSRKQ AEERVEKAVV CVQSMFRSKK AQQEYQRMKM VHKLAMLEYE  900
SLLDPSSDMD A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein