PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291240.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | CAMTA | ||||||||
Protein Properties | Length: 223aa MW: 24943.3 Da PI: 4.2807 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 60.9 | 2.4e-19 | 4 | 47 | 74 | 117 |
CG-1 74 KvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 +vg+ve+l+cyYah+e+np+fqrr+yw+L+ ++e+ivlvhy+e XP_021291240.1 4 QVGNVETLNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYREI 47 699**************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MHDQVGNVET LNCYYAHGEQ NPNFQRRSYW MLDPAYEHIV LVHYREINET KPSSASIVQS 60 PVSSSGFSLS PNSYTSQNPG SNSLASDVHE PYQNLSSPGS VEVSSDIVIK NNGIDNTVEY 120 ASPADLQVSQ ALKRLEEQLS LNEDSFKEMS PLCSLDGDTN DSRVLEYGRE ITKQELQADL 180 LYEPNDIVQD HLYSQHTRVE NYSNTFGLLP DGGLLFFQLS KSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 6e-26 | CAMTA family protein |