PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291030.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 361aa    MW: 39730 Da    PI: 6.248
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291030.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.31.5e-33199257159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+s++prsYYrCt+agC vkk+vers++dp+vv++tYeg+H+h+
  XP_021291030.1 199 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPTVVVTTYEGQHTHP 257
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MEKKKPEGEQ RENSMANLRF SDENPAASGY GGGIFDMATG ACEGSGGDKW GTLGFMDLLG  60
IHQDFAAPSL FDSFQPPILS SPPPPPPPSS SELHQEILHE IQLESKQLIQ QQQQLQGLPS  120
PASTVPESSE VLNNPATPNS SSISSSSNEA ANDEQTKTGD DEEQDQEKTK KQLKPKKKNQ  180
KRQREPRFAF MTKSEVDHLD DGYRWRKYGQ KAVKNSPYPR SYYRCTTAGC GVKKRVERSS  240
DDPTVVVTTY EGQHTHPCPI TPRGSIGISP DSSTLGAASA ASFIIPQPQY LHQQQHYIYT  300
SSPPLNITTA TTTSSSFINP LFPAFLQERR VAPPSASSLR DHGLLQDIVP SQMRNEAKEE  360
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.18e-57WRKY family protein