PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291026.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 143aa    MW: 15891.2 Da    PI: 9.5148
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH162.2e-0533721054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R +++ +++  L++l+ +      +K + a++L +A+eYI+ L
  XP_021291026.1 33 KDRKEKLGERIVALQQLVSPY-----GKTDTASVLLEAMEYIRFL 72
                    6788889999999*****999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MMENKRSPCS VDHSSFTSLA SKRQKADLSI STKDRKEKLG ERIVALQQLV SPYGKTDTAS  60
VLLEAMEYIR FLHEQVKVLS APYLQTAPTN NMQDVEHYSL RSRGLCLVPI SCTAGVARSN  120
GADIWAPIKT TSPKFDKAIS QFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.32e-65bHLH family protein