PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 158aa MW: 17557.1 Da PI: 8.7377 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.8 | 2.6e-05 | 48 | 87 | 10 | 54 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + R +++ +++ L++l+ + +K + a++L +A+eYI+ L XP_021291025.1 48 KDRKEKLGERIVALQQLVSPY-----GKTDTASVLLEAMEYIRFL 87 6788889999999****9999.....9****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MQTLCSCEEG REIGKMMENK RSPCSVDHSS FTSLASKRQK ADLSISTKDR KEKLGERIVA 60 LQQLVSPYGK TDTASVLLEA MEYIRFLHEQ VKVLSAPYLQ TAPTNNMQDV EHYSLRSRGL 120 CLVPISCTAG VARSNGADIW APIKTTSPKF DKAISQFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05710.3 | 6e-67 | bHLH family protein |