PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021290978.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GRAS
Protein Properties Length: 457aa    MW: 51125.9 Da    PI: 6.1106
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021290978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS320.24.2e-98844563374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL ecA+a+s++d +++++lL+ l+elasp+gd  q+la+yf++AL  + ++s++++y++l++ ++++++ +++ +    f+evsP+ +f+h++
  XP_021290978.1  84 RLLRECARAISDKDSTKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYRTLTSVAERSHSFDSARKLILKFQEVSPWTTFGHVA 178
                     7899**********************************************************9999996555555455555************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledlel 191
                     aN aIlea++ge ++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+  ++  +  ++e+ +r++kfA+ +gvpfefnv+   ++l +l+ 
  XP_021290978.1 179 ANGAILEALDGEAKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTVVVT-ANIVRSVMKEISQRMEKFARLMGVPFEFNVIsGLNHLGELTK 272
                     ****************************************************.667999************************955679****** PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse..sFlerflealeyysalfdsleaklpreseerik 284
                     e+L v ++Ea+aVn++ +l r+      +e+ r +v+++++sl Pkvv+vve+ead +s+  +F++ f e+l++y+  fd+le++++++s+e+ +
  XP_021290978.1 273 EALGVLEDEAVAVNCIGALRRVA-----VEE-RGAVIQMFQSLGPKVVTVVEEEADFSSTryDFVRCFEECLRFYTLYFDMLEESFAPTSNEKLM 361
                     **********************8.....444.89*********************99555449******************************** PP

            GRAS 285 vErellgreivnvvacegae.....rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvS 371
                     +Ere  +r+iv v+ace  e       er+e+ ++W++rl+ea F+pv +s+++++++k+ll+++   g+ +    +++  l+l+Wk++++v++S
  XP_021290978.1 362 LERE-CSRSIVRVLACEDGEdgtagECERREKGSQWSDRLKEA-FSPVGFSDDVVDDVKALLKRYR-AGWALAqphQDETGLYLTWKEEAVVWAS 453
                     ****.89*********976533334679*************98.*********************9.7777775557799999************ PP

            GRAS 372 aWr 374
                     aW+
  XP_021290978.1 454 AWK 456
                     **8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    
MKLSSAKVPK ESKGASPIDG HNYSLHSKRR SGRTTLPVQA AEQWSVAVDM HNTNSIQPQN  60
SHTSTSRSSD SGEPCATGNK WASRLLRECA RAISDKDSTK IHHLLWMLNE LASPYGDCDQ  120
KLASYFLQAL FCKATESGQR CYRTLTSVAE RSHSFDSARK LILKFQEVSP WTTFGHVAAN  180
GAILEALDGE AKLHIIDISN TLCTQWPTLL EALATRNDET PHLKLTVVVT ANIVRSVMKE  240
ISQRMEKFAR LMGVPFEFNV ISGLNHLGEL TKEALGVLED EAVAVNCIGA LRRVAVEERG  300
AVIQMFQSLG PKVVTVVEEE ADFSSTRYDF VRCFEECLRF YTLYFDMLEE SFAPTSNEKL  360
MLERECSRSI VRVLACEDGE DGTAGECERR EKGSQWSDRL KEAFSPVGFS DDVVDDVKAL  420
LKRYRAGWAL AQPHQDETGL YLTWKEEAVV WASAWKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-143GRAS family protein