PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021290978.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GRAS | ||||||||
Protein Properties | Length: 457aa MW: 51125.9 Da PI: 6.1106 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 320.2 | 4.2e-98 | 84 | 456 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 +lL ecA+a+s++d +++++lL+ l+elasp+gd q+la+yf++AL + ++s++++y++l++ ++++++ +++ + f+evsP+ +f+h++ XP_021290978.1 84 RLLRECARAISDKDSTKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYRTLTSVAERSHSFDSARKLILKFQEVSPWTTFGHVA 178 7899**********************************************************9999996555555455555************** PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledlel 191 aN aIlea++ge ++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+ ++ + ++e+ +r++kfA+ +gvpfefnv+ ++l +l+ XP_021290978.1 179 ANGAILEALDGEAKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTVVVT-ANIVRSVMKEISQRMEKFARLMGVPFEFNVIsGLNHLGELTK 272 ****************************************************.667999************************955679****** PP GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse..sFlerflealeyysalfdsleaklpreseerik 284 e+L v ++Ea+aVn++ +l r+ +e+ r +v+++++sl Pkvv+vve+ead +s+ +F++ f e+l++y+ fd+le++++++s+e+ + XP_021290978.1 273 EALGVLEDEAVAVNCIGALRRVA-----VEE-RGAVIQMFQSLGPKVVTVVEEEADFSSTryDFVRCFEECLRFYTLYFDMLEESFAPTSNEKLM 361 **********************8.....444.89*********************99555449******************************** PP GRAS 285 vErellgreivnvvacegae.....rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvS 371 +Ere +r+iv v+ace e er+e+ ++W++rl+ea F+pv +s+++++++k+ll+++ g+ + +++ l+l+Wk++++v++S XP_021290978.1 362 LERE-CSRSIVRVLACEDGEdgtagECERREKGSQWSDRLKEA-FSPVGFSDDVVDDVKALLKRYR-AGWALAqphQDETGLYLTWKEEAVVWAS 453 ****.89*********976533334679*************98.*********************9.7777775557799999************ PP GRAS 372 aWr 374 aW+ XP_021290978.1 454 AWK 456 **8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 457 aa Download sequence |
MKLSSAKVPK ESKGASPIDG HNYSLHSKRR SGRTTLPVQA AEQWSVAVDM HNTNSIQPQN 60 SHTSTSRSSD SGEPCATGNK WASRLLRECA RAISDKDSTK IHHLLWMLNE LASPYGDCDQ 120 KLASYFLQAL FCKATESGQR CYRTLTSVAE RSHSFDSARK LILKFQEVSP WTTFGHVAAN 180 GAILEALDGE AKLHIIDISN TLCTQWPTLL EALATRNDET PHLKLTVVVT ANIVRSVMKE 240 ISQRMEKFAR LMGVPFEFNV ISGLNHLGEL TKEALGVLED EAVAVNCIGA LRRVAVEERG 300 AVIQMFQSLG PKVVTVVEEE ADFSSTRYDF VRCFEECLRF YTLYFDMLEE SFAPTSNEKL 360 MLERECSRSI VRVLACEDGE DGTAGECERR EKGSQWSDRL KEAFSPVGFS DDVVDDVKAL 420 LKRYRAGWAL AQPHQDETGL YLTWKEEAVV WASAWKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37650.1 | 1e-143 | GRAS family protein |