PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021290890.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 285aa    MW: 31958.4 Da    PI: 7.2829
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021290890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.46e-23119179259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDg++WrKYGqK++ ++++pr+Y+rCt++   gC+++k+v++ +++p    +tY+g+H+++
  XP_021290890.1 119 DDGHAWRKYGQKVILNAKHPRNYFRCTHKndqGCRATKQVQQIEDNPPKYRTTYHGHHTCK 179
                     8***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MSSGRRKAIE ELARGRDLTN QLRDLLSKSL GDDGLLGSED LVTKILNSFA NTLSILRSSS  60
GDYDEVSQKP RNSNMSWDGR KSEESGESIK SSTQKDRRGC YKRRKSEHSW TRDSPTLIDD  120
GHAWRKYGQK VILNAKHPRN YFRCTHKNDQ GCRATKQVQQ IEDNPPKYRT TYHGHHTCKN  180
LLKASQLILD SPSKDSSILL SFANTNKQDN SIFSAFPPVK QESKEDMPSD ITYNLSTSSP  240
DYLLSPDHLT AFESSAQMAV LSAADHADVI SGVVDSVDID DLLEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.17e-36WRKY family protein