PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021290852.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

CAMTA

Protein Properties

Length: 1005aa MW: 112036 Da PI: 7.2023

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021290852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	171.3	1.4e-53	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ ++rwl++ e+++iL n+ k++l+ +++ +p+ gsl L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK+g+v+vl+cyYah++ n++fqr XP_021290852.1 20 LEAQHRWLRPVEVCEILSNYPKFRLSDKPPVKPPAGSLYLFDRKTIRYFRKDGHDWRKKKDGKTVKEAHEKLKIGSVDVLHCYYAHGQFNENFQR 114 5679***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcyw+L+ ++e+iv+vhy+evk XP_021290852.1 115 RCYWMLDGQFEHIVFVHYREVK 136 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1005 aa Download sequence
MAQGRRYLPN QQLDLQQILL EAQHRWLRPV EVCEILSNYP KFRLSDKPPV KPPAGSLYLF 60 DRKTIRYFRK DGHDWRKKKD GKTVKEAHEK LKIGSVDVLH CYYAHGQFNE NFQRRCYWML 120 DGQFEHIVFV HYREVKEGYR SGISRILADP GSQSESLQTG SAPSLAHENS PAPTVQTSHT 180 STSRIDWNGQ TLSSEFEDVD SGDYPSTSSP VQPIYGSTSS TASLEPEVAG RNPPGSWFTG 240 SNCNNSSESC FWPEIHHSVT DTISMPDQKL YVERPTAGDF VTHKEAEVRL HDVSDVVTRG 300 DKLISDVEAQ AVGESPQKVI QVPQEYDFSL MGLLSQNYSG PQKVASSSAQ IENESKGSGL 360 NNDEPGELKK LDSFGRWMDK EIGGDCDDSL MASDSANYWN TLDPETDDKE VSSLSHHMQL 420 DIDSLGPSLS QEQLFSIVDF SPDWAYSGVE TKVLIIGNFL QTKELSSAAK WGCMFGEIEV 480 SAEVLTNHVI RCQVPSHAPG CVPFYVTCSN RLACSEVREF EYREKPPGFL FTKAVKITAE 540 EEMHLQVRLA KLLDIGPGRK WLDCSVEECD KCRLKNNIYS MGVANANDSI QSREGLVQNL 600 LKERLCEWLL YKVHEDGKGP HILDDKGQGV IHLAASLGYE WAMGPIVAAG ISPNFRDAQG 660 RTGLHWASYF GREETVVALI KLGVAPGAVD DPTPSFPGGR TAADLASRRG HKGIAGYLAE 720 ADLITHLSSL TVNENVVGND AATTAAQKAS DSAAQVAPSN GALDEQCSLK GSLAAVRKSV 780 HAAALIQAAF RALSFRDRQL TKGNDEMSEV SLELGLLGSL NRLPKMSHFG DYLHTAAAKI 840 QQKYRGWKGR KEFLKIRNRI VKIQAHVRGH QVRKQYKKVV WSVSIVEKVI LRWRRKGAGL 900 RGFRVQKSIE NAAPEIEIGD EYEFLRLGRQ QKVHGVEKAL ARVKSMARDQ EARDQYMRLT 960 TKFGESKVIF STFSCICRYP VILMVRCPLF LNVNLFLKFA PECVP

Sequence ? help Back to Top

Protein Sequence Length: 1005 aa Download sequence

MAQGRRYLPN QQLDLQQILL EAQHRWLRPV EVCEILSNYP KFRLSDKPPV KPPAGSLYLF  60
DRKTIRYFRK DGHDWRKKKD GKTVKEAHEK LKIGSVDVLH CYYAHGQFNE NFQRRCYWML  120
DGQFEHIVFV HYREVKEGYR SGISRILADP GSQSESLQTG SAPSLAHENS PAPTVQTSHT  180
STSRIDWNGQ TLSSEFEDVD SGDYPSTSSP VQPIYGSTSS TASLEPEVAG RNPPGSWFTG  240
SNCNNSSESC FWPEIHHSVT DTISMPDQKL YVERPTAGDF VTHKEAEVRL HDVSDVVTRG  300
DKLISDVEAQ AVGESPQKVI QVPQEYDFSL MGLLSQNYSG PQKVASSSAQ IENESKGSGL  360
NNDEPGELKK LDSFGRWMDK EIGGDCDDSL MASDSANYWN TLDPETDDKE VSSLSHHMQL  420
DIDSLGPSLS QEQLFSIVDF SPDWAYSGVE TKVLIIGNFL QTKELSSAAK WGCMFGEIEV  480
SAEVLTNHVI RCQVPSHAPG CVPFYVTCSN RLACSEVREF EYREKPPGFL FTKAVKITAE  540
EEMHLQVRLA KLLDIGPGRK WLDCSVEECD KCRLKNNIYS MGVANANDSI QSREGLVQNL  600
LKERLCEWLL YKVHEDGKGP HILDDKGQGV IHLAASLGYE WAMGPIVAAG ISPNFRDAQG  660
RTGLHWASYF GREETVVALI KLGVAPGAVD DPTPSFPGGR TAADLASRRG HKGIAGYLAE  720
ADLITHLSSL TVNENVVGND AATTAAQKAS DSAAQVAPSN GALDEQCSLK GSLAAVRKSV  780
HAAALIQAAF RALSFRDRQL TKGNDEMSEV SLELGLLGSL NRLPKMSHFG DYLHTAAAKI  840
QQKYRGWKGR KEFLKIRNRI VKIQAHVRGH QVRKQYKKVV WSVSIVEKVI LRWRRKGAGL  900
RGFRVQKSIE NAAPEIEIGD EYEFLRLGRQ QKVHGVEKAL ARVKSMARDQ EARDQYMRLT  960
TKFGESKVIF STFSCICRYP VILMVRCPLF LNVNLFLKFA PECVP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein