PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021290462.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Nin-like

Protein Properties

Length: 1004aa MW: 109868 Da PI: 5.0164

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021290462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.7	2.7e-29	599	650	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ XP_021290462.1 599 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 650 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1004 aa Download sequence
MEYSLSSKEK GIGYRVPPRG PMEGGEQLGG STKNSISEDP FNFSELMNFD SYAGWCNSPA 60 ATDQMFASFG LSSYPSFPYA CLDSLNITEQ SSGTFVEGGD ALSGMGSSYN CVDRMVLQQT 120 DVHFGNPLDP TDTDEQGVRR NNGGNRQNNT SDVADSLISR PIGQSLDEKM LRALSLFKES 180 SGGGILAQVW VPVKHGDQYM LTTSDQPYLL DQILSGYREV SRTYIFSAEL KPGSFPGLPG 240 RVFISRVPEW TSNVTHYSED EYLRFSHAVN HKVRGSIALP VFEPVEMSCC AVLELVTVNE 300 KPNFDAEMEN VCLALQAVNL RTTAPPRLLP QCLSRNQRAA LAEITDVLRA VCHAHRLPLA 360 LTWIPCNYAE EAVDEIIKVR VREGNKGWDG KCVLCIEDTA CYVNDTEMQD FVHACAAHYL 420 EEGQGIAGKA LQSNHPFFSS DVKTYDISDY PLVHHARKFN LNAAVAIRLR STYTGDDDYI 480 LEFFLPINMK GSSEQQLLLN NLSGTMQRIC RSLRTVSDAE IVEGSKVEFQ RGTVPNFPPM 540 SMSRRSSETA LSAVSDMNSN DRIPLNVSNS RSDGKEADGP PEQAMSGPRR QMEKKRSTAE 600 KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLRKIQTV 660 LDSVQGVEGG LKFDPATGGF VAAGTIIQEF DSQKTLIFSE NNLPVRTPEP VNQEKPSAPL 720 ASCPDGENSV VKLEEDECSF GGNNRGAARS VLVPSTCQES KKSSIPPIDC SEDSKSVALD 780 AGSFQAASIG PAPWTCPENV TMGSYIPEGC DKWGLYKGNL KLEDSDCHFV SRSSSSLAGA 840 DEIDTRMEGD DGIVEHNHQP TSSSMTDSSN GSGSMLHGSS SSSQSFAGAK NSKLKTICVD 900 SSSKITIKAT YKEDTVRFKF EPSAGCFQLY EEVAKRFKIQ SGTFQLKYLD DEEEWVMLVS 960 DSDLQECLEI LEYVGTHNVK FQVRDVPFAT GSSGSSNCFL GGGS

Sequence ? help Back to Top

Protein Sequence Length: 1004 aa Download sequence

MEYSLSSKEK GIGYRVPPRG PMEGGEQLGG STKNSISEDP FNFSELMNFD SYAGWCNSPA  60
ATDQMFASFG LSSYPSFPYA CLDSLNITEQ SSGTFVEGGD ALSGMGSSYN CVDRMVLQQT  120
DVHFGNPLDP TDTDEQGVRR NNGGNRQNNT SDVADSLISR PIGQSLDEKM LRALSLFKES  180
SGGGILAQVW VPVKHGDQYM LTTSDQPYLL DQILSGYREV SRTYIFSAEL KPGSFPGLPG  240
RVFISRVPEW TSNVTHYSED EYLRFSHAVN HKVRGSIALP VFEPVEMSCC AVLELVTVNE  300
KPNFDAEMEN VCLALQAVNL RTTAPPRLLP QCLSRNQRAA LAEITDVLRA VCHAHRLPLA  360
LTWIPCNYAE EAVDEIIKVR VREGNKGWDG KCVLCIEDTA CYVNDTEMQD FVHACAAHYL  420
EEGQGIAGKA LQSNHPFFSS DVKTYDISDY PLVHHARKFN LNAAVAIRLR STYTGDDDYI  480
LEFFLPINMK GSSEQQLLLN NLSGTMQRIC RSLRTVSDAE IVEGSKVEFQ RGTVPNFPPM  540
SMSRRSSETA LSAVSDMNSN DRIPLNVSNS RSDGKEADGP PEQAMSGPRR QMEKKRSTAE  600
KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLRKIQTV  660
LDSVQGVEGG LKFDPATGGF VAAGTIIQEF DSQKTLIFSE NNLPVRTPEP VNQEKPSAPL  720
ASCPDGENSV VKLEEDECSF GGNNRGAARS VLVPSTCQES KKSSIPPIDC SEDSKSVALD  780
AGSFQAASIG PAPWTCPENV TMGSYIPEGC DKWGLYKGNL KLEDSDCHFV SRSSSSLAGA  840
DEIDTRMEGD DGIVEHNHQP TSSSMTDSSN GSGSMLHGSS SSSQSFAGAK NSKLKTICVD  900
SSSKITIKAT YKEDTVRFKF EPSAGCFQLY EEVAKRFKIQ SGTFQLKYLD DEEEWVMLVS  960
DSDLQECLEI LEYVGTHNVK FQVRDVPFAT GSSGSSNCFL GGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein