PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021289860.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 305aa    MW: 34443.5 Da    PI: 8.6686
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021289860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.2e-055577123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ Cg+ F++   L  H+++H
  XP_021289860.1 55 YSCSFCGREFRSAQALGGHMNVH 77
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEQARYWMWT RRRHGLSSHL QASTNGAYDD SWEEQAFAED AAGSLGGCIW PPRSYSCSFC  60
GREFRSAQAL GGHMNVHRRD RARLKQSPSP HGETLHHHDH RNSQSHIQNP FLPMGFQYQP  120
DEVCNFVYNP NPNSDHGTLP SPSSSSRVSP PPTKENCPGK ILISTFSSPI VQERPKTKSP  180
DSSPKSWSNL VADRYYHFSD LSTEGEKSPR ILESGCQLKA DYVQTDMSVS LNLVVRRARP  240
TTSGSREETV GCKRKRTETP TLPFFLKPIS IERHHLQPAD LPELRPSSVD DIDLELRLGV  300
RPKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.11e-25C2H2 family protein