PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289722.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

C2H2

Protein Properties

Length: 227aa MW: 25600.8 Da PI: 9.7797

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289722.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.8	0.00017	146	168	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F L H+r+H XP_021289722.1 146 HECAICGKKFDLGQALGGHMRKH 168 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MEDMLATCDL FISLDIAHCL RPFLAAKDGA LFDSLFINSF HFASKPKQSF SRKIRLTLVD 60 MKRGRENEES VANCLMLQDH GLETKPKLDH SMEDVFECKT CHRRFPSFQA LGGHRASHKR 120 PRLMGESQKA NGSKFLSLAI TKPKMHECAI CGKKFDLGQA LGGHMRKHRA SIYESFSPFP 180 VVAPNFPVLS RSNSKRIMYL DLNLTPLEND LKALFGKMAT KIDNLGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	3e-42	C2H2 family protein