PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021289355.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 175aa    MW: 18985.3 Da    PI: 6.27
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021289355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB186.91.5e-5829126198
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy++plk+yl++yre+eg
  XP_021289355.1  29 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEG 123
                     69********************************************************************************************* PP

           NF-YB  96 ekk 98 
                     ++k
  XP_021289355.1 124 DTK 126
                     975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MADAPAAPAP VSPGGGSHES GEQSPRSNVR EQDRYLPIAN ISRIMKKALP ANGKIAKDAK  60
ETVQECVSEF ISFITSEASD KCQKEKRKTI NGDDLLWAMA TLGFEDYIDP LKIYLTRYRE  120
MEGDTKGSAK GGDASAKKDV QPSPNPQLIH QGSFSQGVNY ANSQAHLMVP MQGTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.11e-89NF-YB family protein