PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288865.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HB-other | ||||||||
Protein Properties | Length: 744aa MW: 83665.9 Da PI: 5.7232 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 14.2 | 7.5e-05 | 517 | 577 | 1 | 54 |
TT--SS--HHHHHHHHHHHHHSSS-..-HHHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknryp..saeereeLAkkl.....gLterqVkvWFqNrRak 54 +rkRt +++eq+++ e++ ++ + ++++++ A+kl ++t +q ++W Nr+a+ XP_021288865.1 517 KRKRTIMNDEQVTIIERALLDEPEMqrNTASIQSWADKLchhgsEVTCSQLRNWLNNRKAR 577 79******************97777225678*****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 744 aa Download sequence |
MFMDVACRAV HLVVRFLQNK LSAQHTDICA KLSPTAEFIV NYLCQQCEAS LQFLQLLCQQ 60 KPFRERILRN KELCGKGGIL FLAQSILKLH ASYFVESSTV MAALSRMKAK VLSILLNLCE 120 AESISYLDEV ASSPGSLDLA KSVALEVLEL LKTGLSKDPK PLTASSDRTY PMGLLQLNAM 180 RLADIFSDDS NFRSYITVHF TDFLSAIFSL SHGDFLSMWC SADLPVREED ATLYYEIFPA 240 VGWALESLSS SDLANTRDLY FNFIYNNMSQ ASYVHQRTSL FVKVIANLHC FVPNICEEQE 300 RNLFLHKFLG CLRKDPSKLL PSFAFVSGPQ KAAAIYRNLR SLLSHAESLI PTFLNEDDLQ 360 LLRVFFDQLQ SLINPAEFEE NRVQEDRSLG GCSSPLLRRE PPDRNNRNGN LKEEMSENSA 420 FQEEEQCFVR SNHMDQADDM TRQDMMDDKD KSVTPIGLKE IDRDVQNVET SGSDTSSTKG 480 KNAVDKLVER LRDSTPAGVR EDEKVETVQT EEKQRRKRKR TIMNDEQVTI IERALLDEPE 540 MQRNTASIQS WADKLCHHGS EVTCSQLRNW LNNRKARLAR ASKDARPPPE PDNAFAGKQG 600 GPQPGHPFKA PDSSGEEAAP SNTRGTRSMS RISTSENPEA PEFVDFGAAE FVQCKPGQFV 660 VLVDGRGEEI GKGKVHQVQG KWCGKSLEES GTCVVDAVDL KADRWVKLPY PSEATGSSFE 720 EAEKKFGVMR VMWDSNKIFL LRPQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 515 | 520 | RRKRKR |