PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288451.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family BES1
Protein Properties Length: 325aa    MW: 34872.8 Da    PI: 8.2897
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288451.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822213.26.4e-6621451150
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc eAGw+ve DGttyrkg+kp e+++++g sa++s +ss++
  XP_021288451.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCIEAGWTVESDGTTYRKGCKPVERMDIVGGSATVSHCSSYH 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                             +sp++sy++sp+sssfpsp+s++ + + +   +sl+p+l++ls++sss+
  XP_021288451.1  97 --------PSPCASYNPSPASSSFPSPASSSYVVNPNGdgNSLIPWLKNLSSASSSA 145
                     ........*******************9999887765577**********9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCIEAG  60
WTVESDGTTY RKGCKPVERM DIVGGSATVS HCSSYHPSPC ASYNPSPASS SFPSPASSSY  120
VVNPNGDGNS LIPWLKNLSS ASSSASSSKL PHLYIHGGSI SAPVTPPLSS PTARTPRIKT  180
DWEDQSARPG WSAQQHSFLP SSTPPSPGRQ IVPDPEWFAG LRIPHSGPTS PTFSLVSSNP  240
FGFKEEVLAG GGSRMWTPGQ SGTCSPAIAA GSDHTADIPM SEVNSDEFAF GSNATGLVKP  300
WEGERIHEEC GSDDLELTLG SSRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-124BES1 family protein