PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021288332.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 21539.4 Da PI: 5.2715 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.3 | 2.9e-16 | 56 | 105 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr + ++g+Wv+eIr+p g + r +lg++ t+e+Aa a++ a +l+ XP_021288332.1 56 KYKGVRCR-RWGKWVSEIRVP---G-TqERLWLGSYSTPEGAAIAHDIAHYCLRR 105 8****955.5**********8...3.35*********************999985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
FLPLTFCFFN LYSLHFPSPF FNLGYTFCSL ASSLSCVSCA LEKTMSAGAV EESIRKYKGV 60 RCRRWGKWVS EIRVPGTQER LWLGSYSTPE GAAIAHDIAH YCLRRPSSLN GLNFPSMLPP 120 NLNVNMSPKS VQKAASDAGM AVDAQMIVIS NETKASENSG VIVGMETESW ENDSSGSWEG 180 SVGKEGEALS ISVEDYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71520.1 | 4e-47 | ERF family protein |