PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021288148.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

STAT

Protein Properties

Length: 708aa MW: 79367.8 Da PI: 5.7616

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021288148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	180.4	2.5e-56	222	343	1	122
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkky 95 ldvvllna+gqpv+k++evvasLlya + ++vek++d+eapLL+sydG+efss+drp+kll+Grasfklkis+Lssk++nr f+ikf i k++ y XP_021288148.1 222 LDVVLLNAFGQPVNKELEVVASLLYAHNRSPVEKTNDEEAPLLASYDGIEFSSSDRPSKLLNGRASFKLKISKLSSKSENRQFCIKFGISKFEGY 316 8******************************************************************************************** PP STAT 96 pfleavskpirCisrsrntrsssltkk 122 +fle +s +irC+sr+r+ r+s+ ++k XP_021288148.1 317 HFLEDFSPSIRCVSRNRTPRTSTGIWK 343 *******************998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MGENNQMIEE KDYILLKDFK VEIEVEEGKG FILCFWVYMF NPNAFPATIL KQVYSETNCS 60 APLLVLNEKT LMLLPLTCLH NEVPDPGNAA LSTEVLKVST QIEYPQYKWI HVAYEVSADF 120 LRLHINAEIA GELQLSSLLN KGSMQNGLRK TTVVGITGGN DFQGYIHDAK VLPSTLSIKD 180 QYVQNPPLQL SIDESSASDI EEDNGFWNIV GGKASCRRIF SLDVVLLNAF GQPVNKELEV 240 VASLLYAHNR SPVEKTNDEE APLLASYDGI EFSSSDRPSK LLNGRASFKL KISKLSSKSE 300 NRQFCIKFGI SKFEGYHFLE DFSPSIRCVS RNRTPRTSTG IWKKTTAVHP LNGSQSFGLD 360 DASLELKHNT VHEAKLSPTS KRVRSGEAKI STIDQLGEEC NSLAWTANQV ENGYGSSMEA 420 RPENFEEVDN SLSDSESTGA RASALKSVSS TAHSVSDLTI FRYCLGGLTD RSLLLKEIAT 480 NASDEEISGF ASQVSLYSGC SHHRHQIKIT KRLIEEGTKA WNMLSQNNIQ VQWESAVFEI 540 EEQFMKIARC STRSLTQQDF ELLRKIAGCR DFMAQENFEK MWCWLYPVAF TLSSDWINAL 600 WNSTSPKWIE GFITKEEAEL SLQGPRGLQE PGTFMLRFPT SRSWPHPDAG SLIVTYVGSD 660 YTLHHRLLSL DNVYSSGVRE MNAKVKPLQD MLLAEPELSR LGRIIRSH

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MGENNQMIEE KDYILLKDFK VEIEVEEGKG FILCFWVYMF NPNAFPATIL KQVYSETNCS  60
APLLVLNEKT LMLLPLTCLH NEVPDPGNAA LSTEVLKVST QIEYPQYKWI HVAYEVSADF  120
LRLHINAEIA GELQLSSLLN KGSMQNGLRK TTVVGITGGN DFQGYIHDAK VLPSTLSIKD  180
QYVQNPPLQL SIDESSASDI EEDNGFWNIV GGKASCRRIF SLDVVLLNAF GQPVNKELEV  240
VASLLYAHNR SPVEKTNDEE APLLASYDGI EFSSSDRPSK LLNGRASFKL KISKLSSKSE  300
NRQFCIKFGI SKFEGYHFLE DFSPSIRCVS RNRTPRTSTG IWKKTTAVHP LNGSQSFGLD  360
DASLELKHNT VHEAKLSPTS KRVRSGEAKI STIDQLGEEC NSLAWTANQV ENGYGSSMEA  420
RPENFEEVDN SLSDSESTGA RASALKSVSS TAHSVSDLTI FRYCLGGLTD RSLLLKEIAT  480
NASDEEISGF ASQVSLYSGC SHHRHQIKIT KRLIEEGTKA WNMLSQNNIQ VQWESAVFEI  540
EEQFMKIARC STRSLTQQDF ELLRKIAGCR DFMAQENFEK MWCWLYPVAF TLSSDWINAL  600
WNSTSPKWIE GFITKEEAEL SLQGPRGLQE PGTFMLRFPT SRSWPHPDAG SLIVTYVGSD  660
YTLHHRLLSL DNVYSSGVRE MNAKVKPLQD MLLAEPELSR LGRIIRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	STAT family protein