PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287831.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family SBP
Protein Properties Length: 191aa    MW: 21461.9 Da    PI: 9.8259
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1406.3e-4468144278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cqve+C  dls+ak+yhrrhkvCe+h+kapvv+v+gl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk++a
  XP_021287831.1  68 CQVEKCGLDLSDAKRYHRRHKVCEIHAKAPVVVVAGLRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSA 144
                     **************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
METTGFRRKS ALKAKMNKGF TAEDLDDDME EEEEEGVGDH GFPDDEKKKK AYGKRGSSGG  60
AGVSPPSCQV EKCGLDLSDA KRYHRRHKVC EIHAKAPVVV VAGLRQRFCQ QCSRFHELSE  120
FDEAKRSCRR RLAGHNERRR KSSAESSTEG SSRKGMSSQL RESQCRQADD QRARVPIAIP  180
GNSSFKRSQN R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15270.16e-45SBP family protein