PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021287649.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

WRKY

Protein Properties

Length: 424aa MW: 46396 Da PI: 6.7229

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021287649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.5e-32	78	135	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k XP_021287649.1 78 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 135 8**************************************.*************85 PP
2	WRKY	106.8	1.1e-33	241	299	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_021287649.1 241 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 299 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MQGQYQTISF NSSSSVKSEM AGSSNELSLS VPVHTATSMA SATAEVDVDQ LNQIGNPNSG 60 IQAGQSDHRS GGPSVPSDDG YNWRKYGQKH VKGSEFPRSY YKCTHPNCEV KKLFERSHDG 120 QITEIIYKGT HDHPKPQPSR RYSSGNIMPG QEERSDKVSS FTGRDDKSSS MYGQMAHSIE 180 PNSTADLSPV TANDDNIDEV DDDDPFSKRR KMDGGVDVTP VVKPIREPRV VVQTLSEVDI 240 LDDGYRWRKY GQKVVRGNPN PRSYYKCTNA GCPVRKHVER ASHDPKAVIT TYEGKHNHDV 300 PTARTSSHDT AGPVAVNGPS RIRSEENDAI SLDLGVGISS VPENSSNEHQ QLHSELVQTQ 360 AQTGGSSFKL IQAAPITTYY GVLNGGMTQY GSRENPSEGR GVEILPLNHS YAYPQSMGRI 420 LTGP

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MQGQYQTISF NSSSSVKSEM AGSSNELSLS VPVHTATSMA SATAEVDVDQ LNQIGNPNSG  60
IQAGQSDHRS GGPSVPSDDG YNWRKYGQKH VKGSEFPRSY YKCTHPNCEV KKLFERSHDG  120
QITEIIYKGT HDHPKPQPSR RYSSGNIMPG QEERSDKVSS FTGRDDKSSS MYGQMAHSIE  180
PNSTADLSPV TANDDNIDEV DDDDPFSKRR KMDGGVDVTP VVKPIREPRV VVQTLSEVDI  240
LDDGYRWRKY GQKVVRGNPN PRSYYKCTNA GCPVRKHVER ASHDPKAVIT TYEGKHNHDV  300
PTARTSSHDT AGPVAVNGPS RIRSEENDAI SLDLGVGISS VPENSSNEHQ QLHSELVQTQ  360
AQTGGSSFKL IQAAPITTYY GVLNGGMTQY GSRENPSEGR GVEILPLNHS YAYPQSMGRI  420
LTGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-161	WRKY family protein