PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021287557.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

WRKY

Protein Properties

Length: 704aa MW: 75555.3 Da PI: 5.5823

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021287557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	24.4	5.9e-08	319	335	2	18
--SS-EEEEEEE--TT- CS WRKY 2 dDgynWrKYGqKevkgs 18 dDgynWrKYGqK+vkg+ XP_021287557.1 319 DDGYNWRKYGQKQVKGK 335 8**************95 PP
2	WRKY	103.8	9.6e-33	501	559	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ XP_021287557.1 501 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 559 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 704 aa Download sequence
MAGIDDNVAI IGDWIPPTPS PRTFFAAMLG DDIGSKPVLE THGENKTEGL FLGSQGIMTA 60 ESNDNKDAHQ GHEQLKEFGS ISEQKSSSRG GLVERMAARA GFNAPRLNTE SIRSADLSLN 120 PEICSPYLTI PPGLSPTTLL ESPVFVSNSL AQPSPTTGKF PFIPNGNGRS SISEPSDRSK 180 DNYFEDINAS SFAFKPFAES NSSFLLGAMS KITPASVPQQ SFPNIEVSVQ SENPLPSQNV 240 DPGKVHSQNS NRPTLQADFS RSSTEKDTGS NNSADHMVFD PVGGTAENSP PLDEPQDEEG 300 DQRGIGDCMA GGVGGAPSDD GYNWRKYGQK QVKGKIIYKG AHNHPKPPPN RRSAIGSSNP 360 LTDMQLEVPE QPGPQNGTDG DPVWATAQKG TVAATHDWRH DSIEVTSSAP VGPEYGNGQA 420 PNGTHFESGD AVDASSTFSN DEDEDDRGTH GSVSLGYDGE GDESESKRRK IEAYAPEMSG 480 ATRAIREPRV VVQTTSEVDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTSA GCTVRKHVER 540 ASHDLKSVIT TYEGKHNHDV PAARSSSHVN SATSSTVTAQ GASSVQTHVH RPEPSQLHNS 600 MVRPASFGPF TLPGRQQLGP SPGFSFGMNQ PGLANLAMAG LGPGQAKLPV LPVHPFVPQQ 660 RQMNEMGFML PKGEPKMEPM SEPGLNLSNN STVYQQIMSR LPQM

Sequence ? help Back to Top

Protein Sequence Length: 704 aa Download sequence

MAGIDDNVAI IGDWIPPTPS PRTFFAAMLG DDIGSKPVLE THGENKTEGL FLGSQGIMTA  60
ESNDNKDAHQ GHEQLKEFGS ISEQKSSSRG GLVERMAARA GFNAPRLNTE SIRSADLSLN  120
PEICSPYLTI PPGLSPTTLL ESPVFVSNSL AQPSPTTGKF PFIPNGNGRS SISEPSDRSK  180
DNYFEDINAS SFAFKPFAES NSSFLLGAMS KITPASVPQQ SFPNIEVSVQ SENPLPSQNV  240
DPGKVHSQNS NRPTLQADFS RSSTEKDTGS NNSADHMVFD PVGGTAENSP PLDEPQDEEG  300
DQRGIGDCMA GGVGGAPSDD GYNWRKYGQK QVKGKIIYKG AHNHPKPPPN RRSAIGSSNP  360
LTDMQLEVPE QPGPQNGTDG DPVWATAQKG TVAATHDWRH DSIEVTSSAP VGPEYGNGQA  420
PNGTHFESGD AVDASSTFSN DEDEDDRGTH GSVSLGYDGE GDESESKRRK IEAYAPEMSG  480
ATRAIREPRV VVQTTSEVDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTSA GCTVRKHVER  540
ASHDLKSVIT TYEGKHNHDV PAARSSSHVN SATSSTVTAQ GASSVQTHVH RPEPSQLHNS  600
MVRPASFGPF TLPGRQQLGP SPGFSFGMNQ PGLANLAMAG LGPGQAKLPV LPVHPFVPQQ  660
RQMNEMGFML PKGEPKMEPM SEPGLNLSNN STVYQQIMSR LPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein